STEM Community Call April 9, 2015
On call: Jamie, Stefan, Kun, Chris, Nereyda, Judy
Next call: Thursday, May 7, 2015
1. Release status updates
· Version 2.0.4 scheduled for May 12, to include fix units now wrong on beta (minor)
· Date for Milestone 1 for Version 3 to be determined
· Making progress with Luna (Eclipse 4.x) and Java 8; build process now working but has a bug
o Bug occurs with the model builder; can change the nature of the object
o Current version of STEM uses Java 6, Eclipse 3; Eclipse 3 and Java 8 are not compatible
2. Updates
Kun
* Attended conference on neglected tropical diseases in London
Maybe only one there doing modeling
Other attendees had hands-on empirical data from the field
As panelist, was asked about STEM, how we use it
* Attended conference in Barcelona sponsored by the European CDC and WHO
Had poster on dengue
Lots of interest; PhD student from Sweden took Kun’s poster back to her university
* Gave 3 hour presentation with Kamesh (IBM India) on dengue to Chinese province’s CDC
2014 outbreak in province in southern part of China, also SE Asia
Heavy rainfall, high temperatures last year; reported five-fold increase in mosquito vector
YouTube is blocked in China, so Kun uploaded STEM videos to a media streaming service in China
STEM malaria and dengue papers are being translated into Chinese
Nereyda
* Currently no problems; one query re mortality rate—what does a 50% rate mean?
Jamie: 50% rate = 0.05/day or 0.5 over 10 days
Is taking notes that she’ll contribute later
Stefan
* Gave 30 minute presentation at Eclipsecon with Kun; well received
Part 1: Stefan gave overview of STEM, model builder, etc.
Part 2: Kun presented on Ebola, wiki
* IBMer there forming Science Group wants STEM to join
Jamie: Science ok, but will NOT change our URLs
3. Feature Request Updates: DEFER ALL UNTIL MIGRATION TO JAVA 8 AND LUNA COMPLETED
[Restricting air travel for certain compartments; New plug in to measure poverty; Plug in for roads in Africa; Batch to control sequencer;
Log automated experiments (?); Modify sequencer to get automatic experiments to run batch]
4. Java 8 compatibility/support and Eclipse 4.x (Luna): TOP PRIORITY See item 1.
· Two Handler s don’t seem to be needed
5. Bugs. See items 1 and 4 above
6. TO DO’s
Jamie: Create new wiki page on Epidemiological Parameters
Kun: Upload slides from talk, put link on wiki
Chris: Get Luna branch, launch model builder, identify bug; follow up