STEM Community Call January 8, 2015
On call: Jamie, Stefan, Nereyda, Matthias, Judy
Next call: Thursday, February 5, 2015
1. STEM 2.0.2 up
- Defer release scheduled for January 9, 2015 to January 30, 2015: Passed, w/o objection
o Will allow to address discussion item #4
o Will include new feature request to allow modeler to log automated experiments
- Integration builds will continue to appear every Friday
2. Updates on dengue modeling: Defer until Kun is on the call
· Working with Kamesh, IBM India, on Singapore project
3. Updates on Ebola modeling
· Jamie: Have seen work University of Melbourne did using STEM
o For Australian government on importation of Ebola into Europe
o Is confidential
· Kun’s paper on Ebola work accepted for presentation at SBP 2015 in March
4. Discussion of Java 8 compatibility/support and Eclipse Luna
· Jamie: Discovered while helping load STEM on a new Mac
o Jamie: Can’t test on his work Mac w/o losing Matlab license
o Stefan: Will test on his new Mac at home
· Jamie: Should we move from Java 6 to Java 7 as minimum for STEM? Now 2 generations behind
o Approved w/o objection
· Matthias: Had problem loading STEM on Window 7 notebook; is it possible to bundle w/ Java?
o Jamie: Check Java version running, get stack trace
o Matthias: Will try again, report to Jamie
o Jamie: A compatibility issue (not a bug), will consider bundlingi
5. Feature Request Updates
- Restricting air travel for certain compartments
- Nereyda: Still in switch over in disease being modeled; having trouble w/ documentation, YouTube
- Jamie: Documentation out of date
- Resolution: Have private phone call to work out with Nereyda who will then update doc
- New plug in to measure poverty
- Jamie: Using lights (from satellites) doesn’t work
- Plug in for roads in Africa: no update
- Three new requests to allow modeler to: prioritizing second item
- Have batch to control sequencer
- Log automated experiments: Make part of new build for January 30
- Modify sequencer to get automatic experiments to run batch
6. Items from BfR
- Matthias: Any publications/conference presentations on use of STEM in Ebola effort?
- Jamie: Several from IBM, one by Alex (Operon)
- TO DO: Judy will update on wiki for move to home page
- Matthias: Any specific instructions on how to cite STEM?
- TO DO: Jamie will prepare, post statement on how to cite STEM if you use it
7. Bugs: None reported
8. Items from participants: None cited