| [stem-dev] Old STEM bugzilla defect |
Hi all, I went though the old bugzilla defect for STEM, here's a list of what I think we should do with them. I used these actions:
1. Move to new repository. The bug is still relevant and open, we should move it.
2. Close. The bug has been fixed. If I'm not sure, I put a '?' in there.
3. Leave in old repository. Typically a "nice-to-have" or minor improvement. We can leave it in the old repository so we remember it.
| Bug ID | Title | Comment | Owner | Suggested Action |
| 207447 | USAF Task 2: Implement Stochastic and Deterministic SEIR, SIR models with Documentation | Stochastic is broken right now, we need to fix it | Justin | Move to new Bugzilla repository |
| 207450 | USAF Task 3: Implement modified SEIR model reflecting threshold effects such as critical susceptible densities | I assume this is the forcing disease model we implemented for the flu. | Jamie | Close |
| 207456 | USAF Task 8: Working wth Academic collaborators to devlop and optimize a STEM model for a real infectious disease (e.g., Tuberculosis in Thailand) | We did this for seasonal flu | Justin | Close |
| 207457 | USAF Task 9: Additional and refined denominator data | The air transport would certainly qualify for this | Not assigned | Close |
| 207460 | USAF Task 10: Documentation | Last think we do | Not assigned | Move to new repository |
| 175597 | Countries with no admin level 0 files | We saw this problem generating .center files for european countries recently. | Jamie | Move to new repository |
| 175976 | The New Scenario Wizard should have a combo box for which sequencer to use | Minor improvement | Not assigned | Close (?) |
| 175963 | STEM RCP Menu Menu bar and sub-menus need better organization | I don't understand this one | Not assigned | Close (?) |
| 177614 | World Scenario requires 1024M to load and run | Is this a bug | Yossi | Close (?) |
| 177952 | Messages in MapDataManagementPreferencePage are not NLS'd | Not assigned | Open in new repository a general NLS translation bug for missing strings | |
| 177963 | Internal Graph Decorator error | I think this is fixed | Yossi | Close |
| 178811 | Population identifier in new Disease Wizard should be specified with pre-populated combo | With the new population decorator for release 2 I think we can do this | Unassigned | Move to new repository |
| 17993 | Requirement for additional commonborder files | Needed | Unassigned | Move to new repository |
| 183422 | Need a visualization of the canonical graph | Don't understand | Not assigned | Close |
| 191554 | Need sample scenarios in order to validate function and serve as tutorials | STEM has lots of sample scenarios, what else do we need? | Stefan | Close |
| 194114 | Need javadoc generation | Yes | Unassigned | Move to new repository |
| 198163 | USA Level 3 datasets not complete | We don't have any level 3 data sets (except Vermont). What is this needed for? The defect has some level 3 attachment files. | Shaun | Close (?) |
| 199800 | Parts of the STEM code base perform direct I/O on System.out and System.err | Fixed I think | Unassigned | Close |
| 200450 | Standard model names are not reflective of model contents | Minor improvement, major code changes to fix. I say close | Jamie | Close |
| 200581 | The death rate among infectious does not have correct epidemologic meaning | With the new meaning of disease death rate this has been fixed. We don't use IF, IR any more. | Unassigned | Close |
| 201627 | Create interface based on rederived deterministic models | I think we did this with the integration ODE solver and new math code. I can't open the attached .pdf so let me know if I'm wrong | Justin | Close |
| 201631 | Test cases for deterministic models based on new mathematics | Yes, test cases still needed | Justin | Move to new repository |
| 207062 | Single Country Graphs for Built in Scenario Japan (and all others) should include node ZZZ with aggregating disease model | Aggregating disease model breaks air transportation right now. So we need a decision here. | Unassigned | Move to new repository |
| 207865 | Relative Value History Providers should remove themselves if/when they have no listeners. | Still a bug? | Yossi | Close (?) |
| 209100 | Missing or incorrect common border relationships | Fixed I think | Unassigned | Close |
| 209266 | Some Level 2 nodes need to be checked for correct containment | Fixed? | Jamie | Close (?) |
| 209555 | The simulation controls in the Control View do not display well on the Mac | Bug | Unassigned (we need someone with MAC to fix) | Move to new repository. |
| 211079 | STEM run controls (run,pause,step) are being disabled | I've seen this, it's pretty annoying | Unassigned | Move to new repository |
| 211619 | Memory leak running multiple simulations. | We've fixed lots of memory leaks recently | Yossi | Close |
| 218036 | Property Selector should allow display of total population at one option in standard map view | A "nice to have", not essential | Yossi | Leave in old repository |
| 222953 | Errors in Country GML data | Fixed? | Jamie | Close |
| 223911 | Common Border edge errors | Lots of fixed probably still needed for all data sets here. | Unassigned | Move to new repository, low prio |
| 233281 | Creation of nodes and edges in GUI | Nice to have, possible to do via .properties files right now. | Leave in old repository | |
| 241291 | Sanity problem with STEM disease models | Fixed I think | Jamie | Close |
| 241684 | RTE: recursive attempt to activate PropertySheet | Still a bug? | Yossi | If still a problem, move. Otherwise close. |
| 244106 | Assertion failure in GeographicControl.dispose | Fixed? | Yossi | Close |
| 244220 | World transportation edges being included in country level scenarios | This was fixed with the new air transport | Unassigned | Close |
| 244459 | We need to NLS all strings in the analysis perspective | Move to a new general NLS bug (see 177952) | Stefan | Move to new repository |
| 245420 | Definition of graph for ZZZ node isn't being created in geography/plugin.xml | Fixed? | Unassigned | Close |
| 250135 | Proposed UI change for Built in Scenarios | Nice to have | Unassigned | Leave in old repository |
| 250814 | Intermittent Bug: Dynamic Node Labels appear with Null Decorators | Fixed? | Unassigned | Close? |
| 254941 | The context menu in the STEM project explorer doesn't have commands to copy/paste/delete | Nice to have | Unassigned | Leave in old repository |
| 254942 | The folders in the STEM project explorer need to be pushed down one level and a migration option for old projects provided. | Yikes, I didn't think we did data migration? | Unassigned | Close |
| 256322 | Workspace relative scenario file selection in Analysis perspective | Nice to have | Jamie | Leave in old repository |
| 257315 | Changing an attribute on a decorator does not get picked up in the next simulation run | I don't think this has been fixed. Yossi suggested clearing cache when resource is saved. Honestly, I'm wondering how useful caching is anyways? | Yossi | Move to new repository |
| 257636 | International characters do not show up properly in the UI | Still a problem | Unassigned | Move to new repository |
| 257945 | canonicalgraph has dangling reference | Fixed? | Unassigned | Close |
| 258976 | Experiments only work if scenario caching is enabled | This has been fixed | Stefan | Close |
| 258989 | Refactoring is broken | Still a problem, difficult to fix, leave low prio | Unassigned | Move to new repository, low prio |
| 259049 | Could use a PercentSIInfector class that works like innoculator | Implemented | Jamie | Close |
| 259385 | Scenario caching seems redundant | Fixed? | Yossi | Close |
| 260104 | Use of class Preferences should be replaced with IEclipsePreferences | Minor | Unassigned | Leave in old repo |
| 260240 | Israel highways | Contains useful attachment for israel highways | Jamie | Move to new repository |
| 260332 | org.eclipse.ohf.stem.internal.geography should be named org.eclipse.ohf.stem.internal.data.geography | Minor | Unassigned | Close after we moved to new SVN repo |
| 260942 | Scrollbars missing on wizard page(s) | Still doesn't work perfectly | Stefan | Move to new repository |
| 261267 | Need to be able to partition user configuration parameters for decorators into groups. | Yes, but requires major model changes | Unassigned | ? |
| 261686 | Running with the same decorator added twice to the model messes up log files | Still a bug | Stefan | Move to new repository |
| 262223 | Dragging and dropping more than one infector/inoculator at a time not supported | Annoying bug | Unassigned | Move to new repository |
| 262927 | Need new Population Provider that understands year, birth rate, and death rate | Part of release 2 | Unassigned | Move to new repository |
| 270537 | The geographic centers have 3 letter code for level 0 geography. The code that does the lookup uses the 2 letter convention. | Fixed | Stefan | Close |
| 177612 | Map control needs visual indication of I/O status | Nice to have | Unassigned | Leave in old repository |
| 177649 | Selecting a simulation control should automatically switch to corresponding active simulation | Last comment was low prio | Unassigned | Leave in old repository |
| 178370 | OutOfMemoryError not handled gracefully | Nice to have | Yossi | Leave in old repository |
| 182830 | org.eclipse.ohf.stem.tests.core throws exceptions | Fixed? | Unassigned | close? |
| 199334 | Outline view should display outline of hierarchy in canonical graph | Nice to have | Unassigned | Leave in old repository |
| 200844 | Need Category "Lattice" under internal data | Nice to have | Unassigned | Leave in old repository |
| 205598 | Validating sequencer causes app to hang | Not really a bug | Unassigned | Close |
| 209590 | GoogleEarth shows entire country as infected after 1 cycle | Fixed? | Unassigned | Close |
| 223026 | STEM Map should enable multiple GIS Map Projections | Nice to have | Unassigned | leave in old repository |
| 1951258 | STEM Wiki changes and suggestions | Not a bug I think | Unassigned | Close |
