Tentative IP Log for technology.stem

This tentative IP Log is generated dynamically from automatically collected project information. This information has not been vetted for accuracy by the Eclipse Foundation and may not represent the true state of the IP of this project(s). Please refer to the official approved IP Log(s) associated with the official release(s) of this project(s) for more information.

Licenses

  • Eclipse Public License v1.0

Third-Party Code

Pre-Req Dependencies

CQThird-Party CodeLicenseUse
1346STEM Datasets Version: 0.0.0Eclipse Public Licenseunmodified source
2118Submission of proposed STEM US Air transport data for IP ReviewEclipse Public Licenseunmodified source
2184STEM Admin 0 (country level) shape of USEclipse Public Licenseunmodified source
2283STEM Dataset for DIVA dataVariousunmodified source
3708Junit Version: 3.8.1 (ATO CQ296) (using Orbit CQ2207)Common Public License 1.0unmodified binary
4467NASA (derived data from NASA images)Public Domainunmodified source
5283Apache Commons Math Version: 2.1.0 (PB Orbit CQ4874)Apache License, 2.0, New BSD licenseunmodified source & binary
5734commons-collections-3.2.jar Version: 3.2 (PB Orbit CQ1909)Apache License, 2.0unmodified binary
5799Map of Norway (Admin Level 2) Version: 0.0.0Creative Commons Attribution - ShareAlike 3.0 Unported (CC By-SA 3.0)modified binary
6306Apache Commons IO Version: 2.0.1 (PB Orbit CQ4791)Apache License, 2.0unmodified binary
6718Apache Batik Version: 1.6 (PB CQ208) **See Comments 6&7 re CSS SAC API (PB Orbit CQ2070)Apache License, 2.0unmodified source & binary
7001Apache Commons Math Version: 3.1.1 (subset)Apache License 2.0, New BSD licenseunmodified binary
7128Google Guice / Inject Core API Version: 3.0.0 (PB Orbit CQ6108)Apache License, 2.0unmodified binary
7129Guava Version: 10.0.1 (PB Orbit CQ6121)Apache License, 2.0unmodified source & binary
7130ANTLR Runtime only: Version: 3.2 (PB Orbit CQ4865)New BSD licenseunmodified source & binary
7131atinject (Package javax.inject) Version: 1.0 (PB Orbit CQ3578)Apache License, 2.0unmodified source & binary
7132Apache Commons Lang Version: 2.1 (PB Orbit CQ1595)Apache License, 2.0unmodified binary
7133log4j Version: 1.2.15 (Subset - see all comments) (PB Orbit CQ3560)Apache License, 2.0unmodified source & binary

Exempt Pre-Req and Works With Dependencies

No Exempt Pre-Req or Works With dependencies

Committers

Past and Present Active
Name Organization  
Matthew Davis IBM
Daniel Doerr
Stefan Edlund IBM
Daniel Ford
Kun Hu IBM
James Kaufman IBM
Yossi Mesika IBM
Dirk Reuter
Christian Thoens
Armin Weiser

Never Active
Name Organization  
Jan-Frederik Wigger

Contributors and Their Contributions

Ref Size Description
Armin Weiser (gmail.com)
317079 109960 bytes New Graph Wizard
Attachment 184162: STEM project using PajekImporter
317079 1345 bytes New Graph Wizard
Attachment 187172: patch for correct visualization of edges by population
Bryan Hobbs (gmail.com)
336836 8536 bytes Mouseover Tooltip: Include Number of Infected
Attachment 190505: Proposed patch for label values
342360 15771 bytes Population identifiers for multi-population scenarios
Attachment 193637: patch
Christian Thoens (bfr.bund.de)
345353 98171 bytes Multi Population Model in which People are aging
Attachment 195291: First Patch
345353 80606 bytes Multi Population Model in which People are aging
Attachment 196149: Change from Map to List in SimpleDataExchangeValue
345353 1424759 bytes Multi Population Model in which People are aging
Attachment 196388: Support for Disease Models
345353 38050 bytes Multi Population Model in which People are aging
Attachment 196614: Bugfixes
345353 463127 bytes Multi Population Model in which People are aging
Attachment 196716: Integration Tests for AgingPopulationModel added
345353 81586 bytes Multi Population Model in which People are aging
Attachment 196808: IntegrationModelLabel and IntegrationModelLabelValue modeled in EMF
345353 1515 bytes Multi Population Model in which People are aging
Attachment 197116: Labels for whole population in multipopulation model labels removed
345353 2069 bytes Multi Population Model in which People are aging
Attachment 197141: GUI changes for transmission rate in multipopulation diseases
345353 5680 bytes Multi Population Model in which People are aging
Attachment 197343: Transportation and Migration now works for Multipopulation Models
346732 29389 bytes FiniteDifference splits time steps when values go negative
Attachment 196234: Patch for the time step splitting
346732 33205 bytes FiniteDifference splits time steps when values go negative
Attachment 196250: Bug fixed from previous patch
346732 32051 bytes FiniteDifference splits time steps when values go negative
Attachment 196256: Bugs in previous patch fixed
346732 834125 bytes FiniteDifference splits time steps when values go negative
Attachment 196577: Avoid stack when because of recursion
347091 17573 bytes Disease Bug in DemographicPopulationModel
Attachment 196491: bug fixed
347091 767033 bytes Disease Bug in DemographicPopulationModel
Attachment 196496: Added new reference data for tests
347873 288375 bytes Model non-EMF classes in EMF
Attachment 197050: Integration of IntegrationLabel and IntegrationLabelValue EMF models
347873 112762 bytes Model non-EMF classes in EMF
Attachment 197442: IntegrationDecorator and SanityChecker modeled in EMF
347873 5624 bytes Model non-EMF classes in EMF
Attachment 197517: Several Changes
349245 94397 bytes Creating a Scenario for Chicken Pox
Attachment 197929: Seasonal Disease Model for Multiple Populations implemented
349973 42373 bytes Several Bugfixes
Attachment 198355: Bugs fixed
Daniel Doerr (cebitec.uni-bielefeld.de)
260104 88572 bytes Use of class Preferences should be replaced with IEclipsePreferences
Attachment 217044: Changed all lines of code in which Preferences were accessed in the old way, and not using the PreferenceStore.
382056 49050 bytes Affecting Graph Map view: Store map position in preferences
Attachment 217843: Patch that improves the Graph Map View by saving the user's last view position/zoom and view settings while running a simulation/scenario.
382056 49792 bytes Affecting Graph Map view: Store map position in preferences
Attachment 217893: Patch that improves the Graph Map View by saving the user's last view position/zoom and view settings while running a simulation/scenario.
382056 3303 bytes Affecting Graph Map view: Store map position in preferences
Attachment 218663: Moved "reset view" action to context menu
383501 16340 bytes Remove unused MonitorPreferences classes
Attachment 217844: Removes both classes.
387808 33392 bytes Hide Graph Map View option pane and store settings in the context menu
Attachment 220149: Stores context menu settings in preferences + new action: hide/show option pane
387808 1053 bytes Hide Graph Map View option pane and store settings in the context menu
Attachment 220158: Fixing "reset view" bug
Daniel Ford (fordcochrane.com)
209100 586760 bytes Missing or incorrect common border relationships
Attachment 82672: updated common border files
Eishay Smith (us.ibm.com)
197351 11591 bytes StochasticSEIRDiseaseModelTest patch
Attachment 74278: StochasticSEIRDiseaseModelTest functionality
197351 19315 bytes StochasticSEIRDiseaseModelTest patch
Attachment 74600: new patch
197351 19321 bytes StochasticSEIRDiseaseModelTest patch
Attachment 74619: update to the patch
197351 21250 bytes StochasticSEIRDiseaseModelTest patch
Attachment 74812: update to the patch
James Kaufman (us.ibm.com)
178807 1784 bytes The Stochastic Disease Models are not available in the new Disease Model Wizard
Attachment 79426: Update to plugin.xml to plug in stochastic diseases
181860 39633 bytes Most Geographic names are all UPPERCASE
Attachment 65872: Revised letter S country names
183018 6291 bytes Many/most physical containment relationships for countries are missing
Attachment 82350: Containment data for Thailand
183018 1404692 bytes Many/most physical containment relationships for countries are missing
Attachment 82468: Containment Data for World
184504 5448 bytes The string "NEWFOUNDLAND" is used as a ISO-3166-2 code
Attachment 65493: newfoundland id patch
186043 25487 bytes Stochastic disease model needs to be modeled explicitly
Attachment 66379: stochastic model and tests in progress
186043 13921 bytes Stochastic disease model needs to be modeled explicitly
Attachment 66570: Stochastic Disease Model and tests
186255 15812 bytes Bug in computation of Standard Disease Models, possible underflow for extreme parameters
Attachment 74754: Corrects bug with transitions computed independant of deaths
186255 15389 bytes Bug in computation of Standard Disease Models, possible underflow for extreme parameters
Attachment 75071: Faster more efficient code. Same fix
186255 40422 bytes Bug in computation of Standard Disease Models, possible underflow for extreme parameters
Attachment 75462: Additional Fixes to disease logic
188389 94834 bytes User Doc: Creating a new disease tutorial is not written
Attachment 82110: Example New Disease Model Package
188389 3781 bytes User Doc: Creating a new disease tutorial is not written
Attachment 82225: Standalone user doc for disease
188389 34068 bytes User Doc: Creating a new disease tutorial is not written
Attachment 82226: figure 1
188389 28314 bytes User Doc: Creating a new disease tutorial is not written
Attachment 82227: figure 2
188391 3161 bytes User Doc: Creating a new Graph tutorial is not written.
Attachment 82229: Graphs Stand alone - no figures
188393 3120 bytes User Doc: Creating a new Model tutorial is not written.
Attachment 82230: Model Stand alone
188393 2489 bytes User Doc: Creating a new Model tutorial is not written.
Attachment 82231: figure 1
188393 32983 bytes User Doc: Creating a new Model tutorial is not written.
Attachment 82232: figure 2
188396 10810 bytes User Doc: Creating a new Scenario tutorial is not written.
Attachment 82233: Scenario standalone
188396 49695 bytes User Doc: Creating a new Scenario tutorial is not written.
Attachment 82234: figure 1 of 1
188398 6820 bytes User Doc: Creating a new Project tutorial is not written.
Attachment 82236: project stand alone
188398 2140 bytes User Doc: Creating a new Project tutorial is not written.
Attachment 82237: figure 1
188398 56715 bytes User Doc: Creating a new Project tutorial is not written.
Attachment 82238: figure 2
188398 20552 bytes User Doc: Creating a new Project tutorial is not written.
Attachment 82239: Figure 3
188398 7099 bytes User Doc: Creating a new Project tutorial is not written.
Attachment 82240: New Project Standalone replaces patch #1
188400 3193 bytes User Doc: Creating a new Sequencer tutorial is not written.
Attachment 82241: sequencer stand alone
188400 49695 bytes User Doc: Creating a new Sequencer tutorial is not written.
Attachment 82242: figure 1
188402 4123 bytes User Doc: Creating a new Infector tutorial is not written.
Attachment 82243: infector stand alone
188402 2130 bytes User Doc: Creating a new Infector tutorial is not written.
Attachment 82244: figure 1 of 2
188402 35133 bytes User Doc: Creating a new Infector tutorial is not written.
Attachment 82245: figure 2 of 2
188402 4557 bytes User Doc: Creating a new Infector tutorial is not written.
Attachment 82246: Correct Patch for Infector Stand alone (attachement #1 is file not patch)
197346 1878 bytes MapView Colors do not use full dynamic range.
Attachment 74509: This resolves the color dynamic range bug
198033 2643 bytes Must have a Maximum Gain parameter and assertion to bound the noise level in any stochastic model
Attachment 74736: Patch 1 of 2 that must be applied together to fix this bug.
198033 20900 bytes Must have a Maximum Gain parameter and assertion to bound the noise level in any stochastic model
Attachment 74737: Patch 2 of 2 that must be applied together to fix this bug
198033 1164 bytes Must have a Maximum Gain parameter and assertion to bound the noise level in any stochastic model
Attachment 74755: Replaces Patch 2 of 2
198033 2643 bytes Must have a Maximum Gain parameter and assertion to bound the noise level in any stochastic model
Attachment 74756: Patch 1 saved as a patch format
198593 1065 bytes TEST_GAIN constant in StochasticSEIRDiseaseModelTest is too large
Attachment 75174: Changed TEST_GAIN to valid value
198847 25228 bytes Need Implementation of Stochastic SIR model and tests
Attachment 75364: New Stochasting SIR and SI implementations patch 1 of 2
198847 45552 bytes Need Implementation of Stochastic SIR model and tests
Attachment 75365: Tests for New Stochastic Models SIR and SI. Patch 2 of 2
198848 2045 bytes DiseaseModelTestUtil.closeEnough() should not have hard coded Tollerance
Attachment 75363: Patch for tollerance
199329 15067 bytes Need more than one single foreground color so different labels automatically show up in different colors
Attachment 75787: MultiColor Preference Patch
199329 37768 bytes Need more than one single foreground color so different labels automatically show up in different colors
Attachment 75876: This patch #2 resolvest this bug
199329 36356 bytes Need more than one single foreground color so different labels automatically show up in different colors
Attachment 76062: enables multicolor mulitvar display
200889 3283 bytes Javadoc wrong attribute in LavelValueTest classes
Attachment 76733: Patch to fix javadoc
200890 3545 bytes Plug in Stochastic Models - Need to add extension
Attachment 76734: Plugs in stochastic models
203858 9907 bytes BIRT report view doesn't stop displaying when the coresponding simulation is stopped
Attachment 81889: Cleans up reports on end of simulation
203858 12735 bytes BIRT report view doesn't stop displaying when the coresponding simulation is stopped
Attachment 81894: better
203858 18637 bytes BIRT report view doesn't stop displaying when the coresponding simulation is stopped
Attachment 81908: Final Fix complete
203858 19212 bytes BIRT report view doesn't stop displaying when the coresponding simulation is stopped
Attachment 81911: Really final - cleaned up warnings
203858 20376 bytes BIRT report view doesn't stop displaying when the coresponding simulation is stopped
Attachment 81980: Fixes to initialization
203861 17639 bytes BIRT report view doesn't allow multiple plots of selected properties.
Attachment 80003: Shows all properteis in the time series display
203861 20296 bytes BIRT report view doesn't allow multiple plots of selected properties.
Attachment 80253: Stand Alone Time series Patch
204482 2208 bytes Colors in Multicolor display are all broken
Attachment 82581: mapColorPatch
204483 6941 bytes Time Delay for Graphics should allow float or double values (delays of fraction of second)
Attachment 85429: Changes time delay units and all default values to MILLISECS
204483 1904 bytes Time Delay for Graphics should allow float or double values (delays of fraction of second)
Attachment 85430: Patch 2 of 2: This second SVN GE patch should be committed AFTER applying patch in attachement #1
205104 48331 bytes Need phase space display and multiple axis propertySelector
Attachment 79505: Phase Space view
205104 54832 bytes Need phase space display and multiple axis propertySelector
Attachment 79509: Integration with Preference.
205104 56352 bytes Need phase space display and multiple axis propertySelector
Attachment 79525: Fixed typo
205104 65894 bytes Need phase space display and multiple axis propertySelector
Attachment 79583: Multiple bug fixes
205104 69057 bytes Need phase space display and multiple axis propertySelector
Attachment 79598: Report view (chart) now uses a list of properties to display
205104 78940 bytes Need phase space display and multiple axis propertySelector
Attachment 79616: Report (Time Series) view shows all properties in full color
205104 79536 bytes Need phase space display and multiple axis propertySelector
Attachment 79686: Dynamically Add new lines as needed
205104 79827 bytes Need phase space display and multiple axis propertySelector
Attachment 79745: Now Shows the appropriate number of property selection combos
205104 79827 bytes Need phase space display and multiple axis propertySelector
Attachment 79824: Fixed bug caused in map selector
205104 38176 bytes Need phase space display and multiple axis propertySelector
Attachment 79995: Standalone Phase Space View Patch
205104 46629 bytes Need phase space display and multiple axis propertySelector
Attachment 80007: New Standalone phase space patch
205746 1068 bytes Property Selector needs unique name or unique ID
Attachment 79911: Added String id to PropertySelector
206915 62994 bytes Display Multiple Report views
Attachment 81213: Displays charts. Issue still on remove.
206915 63608 bytes Display Multiple Report views
Attachment 81308: This displays multiple views, add by click (adds to preferences)
206915 113944 bytes Display Multiple Report views
Attachment 81508: Added Phase Space charts and refactored
206915 114041 bytes Display Multiple Report views
Attachment 81514: Cleaned up warnings and JavaDoc
208129 3925 bytes Report Views do not dispose correctly
Attachment 81651: Fixes bug
208279 16166 bytes Report Views should use Mementos to Perist state
Attachment 81823: Preferences Implemented As Dialog Setting
208464 6291 bytes Time Series view doesn't work with built-in Thailand Scenario
Attachment 82346: Containment data for Thailand
208632 184051 bytes Need documentation for Report Views
Attachment 82017: Documentation for Report Views
208632 460485 bytes Need documentation for Report Views
Attachment 82106: New patch for both Report View and Scenario tutorial
208650 221413 bytes Need Scenario Tutorial Documentation
Attachment 82024: Scenario Tutorial Documentation
208684 3755 bytes Property Selector for PhaseSpaceView needs to set to default X,Y Labels when possible
Attachment 82043: First try - not quite there
208684 4189 bytes Property Selector for PhaseSpaceView needs to set to default X,Y Labels when possible
Attachment 82045: Correctly fires PropertySelectionEvent on Success
208769 4881 bytes Phase Space View plot axies are not labeled.
Attachment 82543: Adds axis labels to phase space plot
208769 739 bytes Phase Space View plot axies are not labeled.
Attachment 82781: missing file messages.properties in this patch
208789 1633 bytes Clicking on objects in the Designer perspective creates invalid Report Views
Attachment 82113: FIlter for Nodes only. Fixes problem with Designer objects creating reports
208832 625105 bytes USER DOC consolidate Tutorial Bug
Attachment 82146: Consolidated Tutorials Patch
208832 244966 bytes USER DOC consolidate Tutorial Bug
Attachment 82147: All Images (jpg) for Tutorials
208832 790229 bytes USER DOC consolidate Tutorial Bug
Attachment 82157: New Consolidate Patch Documents advance disease model plugin as well
208832 338328 bytes USER DOC consolidate Tutorial Bug
Attachment 82158: New consolidate images include advance example as well
209094 6133 bytes ChartException in Time Series view
Attachment 82500: reset data patch
209352 15029 bytes Need utility to find containment relationships for world
Attachment 82544: Utility to find containment relationships for world
209360 1499 bytes Example disease model parameters should not be hard coded
Attachment 82551: Removed hardcoded parameters
211153 212937 bytes Example Disease model needs refactor and regeneration of emf model
Attachment 83925: Patch resolves this bug
211153 100512 bytes Example Disease model needs refactor and regeneration of emf model
Attachment 83994: Fixes bug with Editor and makes Impl class public
211153 6111 bytes Example Disease model needs refactor and regeneration of emf model
Attachment 83998: same as above but without presentation package
211836 5490 bytes Time series display has time steps as x axis
Attachment 85437: Patch adds correct axis label based on actual sequencer time delta
211836 5137 bytes Time series display has time steps as x axis
Attachment 85438: New patch eliminats warnings
212354 4160 bytes Need better Color Scheme for Time Series View
Attachment 84819: Patch improves Time Series Color Scheme
212354 3794 bytes Need better Color Scheme for Time Series View
Attachment 85002: recreated patch after resynch
212355 1353 bytes Default Initialization of all Report Views brings up too many graphs or charts on startup when running a continent scenario
Attachment 84820: Fixes Default Initialization of all Report Views
212355 1419 bytes Default Initialization of all Report Views brings up too many graphs or charts on startup when running a continent scenario
Attachment 85018: recreated patch after synching with new changes
212356 9398 bytes Need better documentation on Wiki for using EMF to create a new Disease Model from scratch
Attachment 84821: EMF how to step by step text
212789 1579 bytes ItemProviderFactories hard coded in DiseaseModelPropertyEditor
Attachment 85208: Temporary Patch for Research disease model
212789 2257 bytes ItemProviderFactories hard coded in DiseaseModelPropertyEditor
Attachment 85209: new Temporary Patch including Manifest
212906 1791 bytes Relative Value History Provider has hardcoded limit to maximum time entries
Attachment 85202: Patch removes hardcode time log limit
213656 6658 bytes Need user tutorial for composing a new graph
Attachment 85689: patch contains html for tutorial on creating a new graph
213656 133527 bytes Need user tutorial for composing a new graph
Attachment 85690: Images required for tutorial patch
215104 59423 bytes Need better mathematics in built in Disease models
Attachment 86749: Fixes math, mixing math, tests, and javadoc
215104 65331 bytes Need better mathematics in built in Disease models
Attachment 86861: Replaces first patch
215105 6947 bytes Time Series Report should get constants from STEMTime.Units
Attachment 86750: Resolves this bug
215106 1911 bytes Disease Messages missing for stochastic models
Attachment 86751: patch adds missing nls strings
215147 4966 bytes RandomGeneratorPropertyDescriptor should not appear in the new disease Wizard
Attachment 86776: This patch resolves the bug. Only apply this AFTER patching 215104
216363 1055 bytes User must be able to set PhysicallyAdjacentInfectiousProportion for a disease model
Attachment 87720: Puts physicallyadjacent infectious proportion back in the disease editors
216363 1760 bytes User must be able to set PhysicallyAdjacentInfectiousProportion for a disease model
Attachment 87806: Added missing NLS
216480 18502 bytes Build in diseases have incorrect parameters and are missing the new parameter to define Reference_Population_Density
Attachment 87786: Better parameter for Built in diseases, adds the new parameter to define Reference_Population_Density
217729 2743 bytes Unused code in Report view classes
Attachment 88828: Patch removes unused code
220451 867 bytes Record.java parsing of Admin level is too sensitivie to white space
Attachment 90793: Patch resolves bug
220468 82073 bytes Need infrastructure to define edges and labels for road transportation networks
Attachment 90806: Road Transportation infrastructure and tests
222078 80643 bytes Need export utility to CSV File
Attachment 92056: Checked in New Project to address this bug. See Attachment
222087 951 bytes CSV Logger populatveView() needs to be synchronized when running in batch mode
Attachment 92061: resolves bug
222274 3619 bytes CSV Logger view needs better look and feel
Attachment 92205: Better look and feel
222282 1029 bytes CSV Logger output folder time data are off
Attachment 92208: resolves bug
222314 12405 bytes sNeed Documentation for use of CSV Logger
Attachment 92231: Logger Documentation
Jan Pieper (almaden.ibm.com)
341433 7142 bytes Incorrect Build Path specifies java1.6 instead of java 1.5
Attachment 192236: patch file setting the correct java 1.5 build path
341438 5683 bytes Character encoding problems on ubuntu 10.10 linux
Attachment 192241: utf-8 conversion of several files
341438 31075 bytes Character encoding problems on ubuntu 10.10 linux
Attachment 192302: Full utf-8 files as per Matt's request
343887 0 bytes Updated earthscience data for year 2009
Attachment 194092: patch file
343887 2140 bytes Updated earthscience data for year 2009
Attachment 194107: EarthScienceLabelValueTest.java
343887 2811 bytes Updated earthscience data for year 2009
Attachment 194108: EarthScienceLabelTest.java
Jan-Frederik Wigger (eclipse.org)
195456 291 lines Pajek null exception catch, save changes in labels without pressing enter, contain hierarchy of graphs under models after opening canonical graph
4d07bd 568 lines added labels should be saved now. -- sometimes, changes are not shown directly after reopening graph
75151d 8 lines fix bugs: changes in spatial information, titles, lables and adding lables is visible when re-opening graph; before: after waiting/restarting STEM changes were visible
b4c709 601 lines Some improvements to the GraphEditor (display overlaying edges, adding edges, edit edge values)
fa1b40 249 lines fix bugs: changes in spatial information, titles, lables and adding lables is visible when re-opening graph; before: after waiting/restarting STEM changes were visible
John Thomas (seabrightbeach.com)
209100 6368 bytes Missing or incorrect common border relationships
Attachment 82620: temp fix for commonborder problem
John Thomas (gmail.com)
173676 4769 bytes Create OHF STEM web page
Attachment 62732: updated version of the main web page
175931 759 bytes Stem Project dependencies need resolution
Attachment 63202: Part of the fix for 175931 -dependencies on junit tests
175941 3881 bytes Implement the Eclipse update mechanism in STEM
Attachment 77387: Zip file to create 2 new projects in STEM
175941 5258 bytes Implement the Eclipse update mechanism in STEM
Attachment 78581: org.eclipse.ohf.stem.feature
175941 6206 bytes Implement the Eclipse update mechanism in STEM
Attachment 78583: org.eclipse.ohf.stem.feature.prereq
175941 7120 bytes Implement the Eclipse update mechanism in STEM
Attachment 78584: org.eclipse.ohf.stem.ui
175941 26795 bytes Implement the Eclipse update mechanism in STEM
Attachment 82121: updated features
175941 6224 bytes Implement the Eclipse update mechanism in STEM
Attachment 82475: feature.prodcut
175941 1927 bytes Implement the Eclipse update mechanism in STEM
Attachment 82567: updates to feature.xml
176541 6873 bytes Display polygon on GoogleEarth based on InternalMap selection
Attachment 78112: patch to org.eclipse.ohf.stem.ui project
176541 27702 bytes Display polygon on GoogleEarth based on InternalMap selection
Attachment 78118: patch to generate thumbtack in GE when MapView clicked
176541 720 bytes Display polygon on GoogleEarth based on InternalMap selection
Attachment 78127: add geography as requirement
176541 970 bytes Display polygon on GoogleEarth based on InternalMap selection
Attachment 78207: fix method signature in junit test
176541 10823 bytes Display polygon on GoogleEarth based on InternalMap selection
Attachment 78778: add code in the ui.ge project to implement change
176932 1509 bytes Make the initial perspective "Simulation" with properly sized windows
Attachment 62552: Change default perspective to Simulation
176932 2344 bytes Make the initial perspective "Simulation" with properly sized windows
Attachment 62554: Changes to Simulation Perspective
178389 3791 bytes SimulationControl not updating cycle # and Time
Attachment 67715: cleanup of references to sequencer
178613 19841 bytes Readjust horizontal scrollbar on simulation control to avoid clipping of its contents
Attachment 64931: Fix fro problems when resizing window
179040 9147 bytes GoogleEarth ends up with 2 copies of the network link file
Attachment 82908: Fis for multiple kml files and fix for 209427
180021 752 bytes GE Debug option is defaulting to ON
Attachment 62397: patch for this bug
180538 1077 bytes Warning messages from newly build system
Attachment 62700: remove swt dll from build.properties
180592 4970 bytes org.eclipse.ohf.stem.ui.reports no longer works
Attachment 63381: First set of fixes for the reports vies
180592 3966 bytes org.eclipse.ohf.stem.ui.reports no longer works
Attachment 65278: More additions to stem.product
180592 4292 bytes org.eclipse.ohf.stem.ui.reports no longer works
Attachment 65302: Code fixes for ui.reports
181359 3619 bytes move method from junit test file to where it is actually used
Attachment 63138: addition of serializeIdentifiable() to IdentifiableRecord
181477 1779 bytes GE - Test for GE not installed puts out wrong message
Attachment 63204: fis for error message if GE not installed
181860 14191 bytes Most Geographic names are all UPPERCASE
Attachment 63540: revised ZMB
181860 325641 bytes Most Geographic names are all UPPERCASE
Attachment 63547: revised countries V - Z
181860 2263 bytes Most Geographic names are all UPPERCASE
Attachment 63549: revised levle 1 names
181860 119506 bytes Most Geographic names are all UPPERCASE
Attachment 64128: revised T-U
181860 246473 bytes Most Geographic names are all UPPERCASE
Attachment 66139: revised M - O
183092 4590 bytes Remove the need for defining ant variables eclipse.home2 and eclipse.contrib
Attachment 77487: New update.xml
184134 7065 bytes Warning messages generated by Eclipse 3,.3 need to be fixed.
Attachment 65632: fix warning (extra ;) ohf.stem.ui project
184134 1000 bytes Warning messages generated by Eclipse 3,.3 need to be fixed.
Attachment 65639: fix1
184134 664 bytes Warning messages generated by Eclipse 3,.3 need to be fixed.
Attachment 65640: fix 2
184134 564 bytes Warning messages generated by Eclipse 3,.3 need to be fixed.
Attachment 65641: fix 3
184134 530 bytes Warning messages generated by Eclipse 3,.3 need to be fixed.
Attachment 65642: fix 4
184134 3508 bytes Warning messages generated by Eclipse 3,.3 need to be fixed.
Attachment 65643: fix 5
184134 637 bytes Warning messages generated by Eclipse 3,.3 need to be fixed.
Attachment 65644: fix 6
184134 536 bytes Warning messages generated by Eclipse 3,.3 need to be fixed.
Attachment 65645: fix 7
184134 626 bytes Warning messages generated by Eclipse 3,.3 need to be fixed.
Attachment 65646: fix 8
184135 12706 bytes Disease not spreading into Pakastan in Asian Scenarios
Attachment 66308: PAK population
184238 134915 bytes COD/ZAR confusion in data set
Attachment 65543: updates to fix the ZAR->COD plus other - Part 1
184238 25577 bytes COD/ZAR confusion in data set
Attachment 65544: updates to fix the ZAR->COD plus other - Part 2
184238 2019499 bytes COD/ZAR confusion in data set
Attachment 65545: updates to fix the ZAR->COD plus other - Part 3
184238 1422112 bytes COD/ZAR confusion in data set
Attachment 65546: updates to fix the ZAR->COD plus other - Part 4
184463 9295 bytes stem.product for Eclipse 3.3
Attachment 65776: New stem.product with support for BIRT/Help/GE
184463 1156 bytes stem.product for Eclipse 3.3
Attachment 67519: add org.eclipse.core.net to stem.product
184463 5758 bytes stem.product for Eclipse 3.3
Attachment 67845: delete the stem.product.readme - moved to wiki
185148 2654 bytes Change default GE Interface to Manual Display mode
Attachment 65795: 185148 project ..stem.ui.ge
186202 11509 bytes SimulationControl does not handle Simulations already active
Attachment 66562: org.eclipse.ohf.stem.ui fix for restarting view
187326 105591 bytes remove unused projects and prereq for junit projects
Attachment 77280: workspace patch
187326 654 bytes remove unused projects and prereq for junit projects
Attachment 78586: remove another junit dependency
187913 4579 bytes The images for the control buttons in the Control view seem to be clipped on their bottoms
Attachment 72301: fix the button size and readjust perspective
188302 11335 bytes Google Earth Preferences documentation need additional explanations
Attachment 68428: help html files for GoogleEarth
188302 5644 bytes Google Earth Preferences documentation need additional explanations
Attachment 79902: updates to help text for GE interface
189290 1145 bytes New warning messages for deprecated code in 3.3RC1
Attachment 68859: remove deprecated warning
191148 620 bytes Help contents is missing tutorials
Attachment 70593: add toctutorials.xml to build.properties
192010 12188 bytes Create a new project org.eclipse.ohf.stem.doc
Attachment 71573: add file to the org.eclipse.ohf.stem.doc project
192010 4604 bytes Create a new project org.eclipse.ohf.stem.doc
Attachment 71574: this updates the stem.ui project to reflect the moving of files to the stem.doc project.
192010 5157 bytes Create a new project org.eclipse.ohf.stem.doc
Attachment 71695: add a new highlevel html so help can be used outside of RCP
192057 4584 bytes GE interface-Manual mode was not properly handling multiple Simulations
Attachment 70926: fix manual mode with multiple simulations
192473 7172 bytes SWT problem with STEM (Incubator) [OHF]
Attachment 71564: stem.product modified for use on MacOS
194114 2973 bytes Need javadoc generation
Attachment 76166: javadoc.xml
194938 8446 bytes ErrorLog Message - Unable to generate KML Control file.
Attachment 73959: Modified how control file is generated
200073 44356 bytes Need to reestablish the org.eclipse.ohf.stem.tests.ui.ge project.
Attachment 76477: create the stem.tests.ui.ge project
205359 81811 bytes Batch Simulation Support
Attachment 85300: Help text for Batch Simulation
206405 10131 bytes Building a scenario appears to work but disease does not spread
Attachment 80701: New Project tutorial
208590 2514 bytes Canada (CAN) and Greenland (GRL) do not share a border
Attachment 82344: remove ca-grl and isr-sau
209100 3051 bytes Missing or incorrect common border relationships
Attachment 82899: Fix missing commonborder between EGY and ISR
209876 2143 bytes GoogleEarth preference preference for KML folder has a bad default
Attachment 82923: fix for folder preference default
Justin (gmail.com)
340720 4831 bytes Mouseover Tooltip: Include Timestamp/Step
Attachment 192682: This attachment adds a timestamp to the mouseover tooltip
Justin Lessler (postalmodern.com)
191531 395 bytes Stop button should have a square icon
Attachment 75343: New icon, square stop button
191531 865 bytes Stop button should have a square icon
Attachment 75345: New stop image
191531 395 bytes Stop button should have a square icon
Attachment 75451: New icon...attempt two
191531 865 bytes Stop button should have a square icon
Attachment 75453: Use this one
191531 1312 bytes Stop button should have a square icon
Attachment 75456: One more try
191531 430 bytes Stop button should have a square icon
Attachment 75458: New icons and updated reference
191531 430 bytes Stop button should have a square icon
Attachment 75459: New icons and updated referneces (same as above, as a patch)
191531 865 bytes Stop button should have a square icon
Attachment 75773: New disabled stop
235608 10747 bytes US Transport System Not Functional
Attachment 103566: patch to fix this
235608 11077 bytes US Transport System Not Functional
Attachment 105506: Patch with fix that passes assertion tests
Kezban Yagci Sokat (gmail.com)
410768 1469 bytes Changes in Greek letters are made.
Attachment 232360: Parameter definitions and representing greek letters
Kun Hu (us.ibm.com)
352137 274330 bytes Dengue Fever Disease Model
Attachment 201763: Captured both cross immunity and antibody dependent enhancement (ADE)
375090 51993 bytes New disease model of Polio (OPV)
Attachment 213061: this is the first version of patch without method implementation but defined all the labels, label values and parameters in addition to SEIR
375090 125102 bytes New disease model of Polio (OPV)
Attachment 213062: Polio disease model patch - 2012/03/21
375447 36830 bytes Implement vaccination code for polio
Attachment 213267: the implementation of vaccination in polio disease model
Matthew Davis (ou.edu)
638a5c 141 lines Updates to data generation ant scripts for Git migration
65a355 2 lines Updating directory map
7eee7a 2 lines Fixing PSF Generator for Earth Science data
c317b1 60 lines Updating base generated version of transition language generator
cadb9e 130 lines Fixing disease scenario generator ant scripts for Git migration
d1b70d 495 lines Updating earth science project build scripts
Matthew Davis (us.ibm.com)
277522 1959 bytes CSV Log Writer causes eventual simulation slowdown
Attachment 136839: Patch to NewCSVLogWriter.java to fix a slowdown side effect
279324 80863 bytes General Data Defects carried over from OHF STEM
Attachment 145582: South Africa Population Fixes
283640 7861 bytes New Solvers Have JavaSE-1.6 Execution Environment requirement
Attachment 141718: Patch to fix classpath and manifest for new solver projects
283643 2066 bytes NullPointerException when setting the name on new disease model
Attachment 141719: Remove Relative Tolernace from Disease Model Editor validation
285654 4799 bytes Unresolved nodes when models are composed in top level model
Attachment 143536: Updates to Cape Verde, Pakistan, and The Zambia.
286809 1384 bytes Data model serialized as ASCII XML, do not support non-ASCII characters
Attachment 144678: Utility.java patch to tell EMF to serialize XML as UTF-8
286966 436861 bytes Need to resolve DISCONTINUITY in infectious change from mixing between regions with very different areas
Attachment 145565: New Geo Area files from new calculation algorithm
Matthew Davis (au1.ibm.com)
03edc2 40 lines Fix for 444880. Adjust the MapViewImageLogger to use the GraphMap view (and associated viewer code) instead of the deprecated MapView/GeographicViewer.
048191 18 lines Upgrading version of data plugins
1b5afa 550 lines Incrementing manifests for version 2.0 release
2001f9 8 lines Add -loadWorkspacePlugins command option to headless launcher to trigger loading of model generator plugins located in the project workspace
26bc74 154 lines Fixing manifests
2f3607 17 lines Fix for Bug 409742. Corrects border transparency in projected map image loggers.
4deb76 2 lines Adding feature build back into build script
536c70 15 lines Updating data package version in build scripts
54f991 54 lines Cleaning up manifests, adding new plugins to features
630ac7 50 lines Update to build process to support Luna 4.4 builds
6502a0 119 lines Re-adding SVG export support to Graph Editor
676453 24 lines Upgrade the Orbit repository and fixing Commons IO and Common Collections packages
6bbe7f 14 lines Build process fixes
7d51ef 12 lines Updates to build process for new data JARs
815400 12 lines Incrementing data plugin version
8be68e 2 lines Adding build backup back to build script
8d41fe 16 lines now fixing versions in feature definitions...
a1ff7a 78 lines Temporarily removing SVG support from Graph Editor due to Batik issues
a3f776 2 lines Don't show console log in runtime
bfa788 5 lines Attempting fix for map selection not visible to reporting views
c4cab3 2 lines Allow '-' to be used in URIs when imported from shapefile
cb28c3 21 lines Adding new bundles into target platform
d080c9 14 lines Adding common model generator plugins to core feature to enable headless integration
da7319 57 lines Updating build process
db387c 8 lines Fix model generator so multi-value ETypes (DoubleValueList, Matrix, etc) will generate correct EMF editors
dd1ace 16 lines Incrementing data plugin version
e9ac4e 36 lines Preliminary fix for headless builds not loading workspace plugins.
f35a31 2 lines Fixes issue with migration edges to allow multi-population identifiers to be used
f8606d 7 lines Fix to allow new models with both disease and population models to build
Matthias Filter (bfr.bund.de)
316321 9487 bytes Title and Description of SwineFluInfector.standard in UsaMexico-Demo needs correction
Attachment 171622: Patch with the changes in SwineFluInfector.standard
Nelson (us.ibm.com)
179827 6616 bytes Simulation Control progress bar doesn't indicate progress when not end time is specified
Attachment 62529: Patch for Bug 179827
181041 1473 bytes The ISO codes for Montenegro (CGR) may be incorrect
Attachment 62977: Patch to but 181041
181041 5997 bytes The ISO codes for Montenegro (CGR) may be incorrect
Attachment 63005: Patch that refactors CGR to MNE
Peter Schwarz (almaden.ibm.com)
245990 18659 bytes Duplicate dates occasionally appear in the output files.
Attachment 111504: Sample output file w. duplicate dates
Roni Ram (il.ibm.com)
259739 56440 bytes New feature for the analysis perspective
Attachment 121304: Patch for the new feature
Tero Parviainen (eficode.fi)
328614 131383 bytes Decrease direct field access in preparation for CDO
Attachment 181643: Patch against trunk, r1110
328670 19156 bytes Comply with EMF contract in equals/hashCode implementations
Attachment 181690: Patch against trunk, r1115
Wakana Kirihata (columbia.edu)
239157 11006 bytes Need to be able to fit model Parameters to data in Analysis perspective
Attachment 106255: Polynomial Drivative
239157 7093 bytes Need to be able to fit model Parameters to data in Analysis perspective
Attachment 106342: New averaging method
239157 8107 bytes Need to be able to fit model Parameters to data in Analysis perspective
Attachment 106345: std of average parameters
239157 30797 bytes Need to be able to fit model Parameters to data in Analysis perspective
Attachment 106765: SEIR patch
239157 7055 bytes Need to be able to fit model Parameters to data in Analysis perspective
Attachment 108100: SI patch
239157 73540 bytes Need to be able to fit model Parameters to data in Analysis perspective
Attachment 108137: SI patch 2
239157 34943 bytes Need to be able to fit model Parameters to data in Analysis perspective
Attachment 108971: added class for nonlinear SEIR fit
239157 34943 bytes Need to be able to fit model Parameters to data in Analysis perspective
Attachment 108972: Nonlinear SEIR class
Yossi Mesika (il.ibm.com)
208280 14524 bytes Need to implement Map Menu Items to control creation of report views from location click
Attachment 82619: Added map menu for controlling reports
208280 14669 bytes Need to implement Map Menu Items to control creation of report views from location click
Attachment 82644: Patch for supporting the new feature
208280 28117 bytes Need to implement Map Menu Items to control creation of report views from location click
Attachment 82962: Patch file for this bug
210201 5586 bytes Update reports help with changes in Bug 208280
Attachment 83770: Update to the reportview.html help file
210201 38163 bytes Update reports help with changes in Bug 208280
Attachment 83771: Updates to the help documentation
210201 31674 bytes Update reports help with changes in Bug 208280
Attachment 83899: Image file for the help

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